Changes in the Immunity, Histopathology, and Metabolism of Crayfish (Procambarus clarkii) in Response to Drought
School of Life Sciences, Nanjing University, Nanjing 210046, China; 505576242yi@sina.com (H.X.); xuexiabai@foxmail.com (X.B.); xxlyu@foxmail.com (Y.L.); luyan@nju.edu.cn (Y.L.)
Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China; jslijj@163.com (J.L.); mengy6@163.com (Y.M.); zhiqiangx@163.com (Z.X.); jstjq@163.com (J.T.)
Abstract
Simple Summary
The freshwater biodiversity crisis is in the spotlight due to the destruction of freshwater ecosystems. Factors threatening freshwater biodiversity are much wider and more complex, including climate change and severe weather events such as drought, unexpected floods, heavy storms, etc. Drought is an important factor contributing to this crisis. In this study, we evaluated changes in the immune function, antioxidant function, histopathology, and metabolites of crayfish in response to drought. The results indicate that drought suppresses immune function, the balance between oxidative and antioxidative systems, and induces tissue damage and metabolic disorder. Our work provides more information on how crayfish respond to drought.
Abstract
Freshwater ecosystems are among the most threatened ecosystems on Earth. The freshwater biodiversity crisis has caused widespread global concern. Drought as one of the factors causing freshwater biodiversity is still poorly understood. Crayfish is often used in academic research as a biological indicator. In this study, flow cytometry, hematoxylin-eosin staining, and untargeted metabolomics were used to analyze the immune function, histopathology, and metabolism of crayfish under drought conditions. After drought exposure, the total hemocytes count (THC) was significantly decreased (from 8.9 × 105 mL−1 in the control group to 2.2 × 105 mL−1 at day 5). Phagocytosis decreased by 66% after 5 days of drought. The level of reactive oxygen species (ROS) in the hepatopancreas was upregulated. Moreover, histological disorder and metabolism changes in the hepatopancreas were obvious. These results indicate that drought suppresses immune function, disrupts the balance of oxidative and antioxidative systems, and induces tissue damage and metabolic changes in crayfish.
Untitled section
Keywords: drought, histopathology, immunity, metabolomics, Procambarus clarkii, ROS
Article notes
Untitled section
Received 2022 Jan 24; Accepted 2022 Mar 29; Collection date 2022 Apr.
1. Introduction
The proportion of freshwater in the world’s water supply is extremely small, at just 0.01%. However, this tiny source of fresh water supports the survival of a vast array of species across the globe [1]. With the increasing demand for freshwater resources, freshwater ecosystems are among the most threatened ecosystems on earth. The freshwater biodiversity crisis includes species loss and the breakdown of ecological processes and resources [2], and has become the focus of research attention [3]. A wide array of factors threaten freshwater biodiversity, including invasive alien species (IAS), climate change, and severe environmental conditions. Long-standing drought is among the severe weather events that threaten freshwater biodiversity [4]. Indeed, the impact of drought in freshwater biodiversity remains poorly understood. There are reports of the response, adaptation, conservation status, and distribution of freshwater taxa under drought conditions [5,6,7,8]. However, the effects on the immunity, antioxidation, histopathology, and metabolism of freshwater taxa remain unclear.
Crayfish are keystone organisms in aquatic ecosystems [9]. The red swamp crayfish Procambarus clarkii is often designated as a bioindicator of aquatic conservation and environmental stress due to its wide, cosmopolitan distribution, long life-span, suitability for laboratory experiments, and high sensitivity to natural and chemical stimuli [10]. Crayfish are among the most important groups of invasive species. They alter the structure and function of nonnative ecosystems and contribute to the freshwater biodiversity crisis [11].
The immune system is essential for crayfish survival and coping with environmental stress and information about the crayfish immune system is limited [12]. Crayfish immunity has received great attention in recent years [13]. Hemocytes are key participants in the immune responses and the total hemocytes count (THC) is often used as an important indicator to reflect the immunological status of crayfish [14]. THC is very susceptible to environmental stress, so it can serve as an important indicator of whether crayfish are under adverse stress. Under normal conditions, a dynamic balance in the production and removal of reactive oxygen species (ROS) is maintained, a balance that is disrupted under adverse conditions [15,16]. An unfavorable consequence of environmental stress is the overproduction and subsequent oxidative damage to organisms. Excessive ROS levels cause protein dysfunction, lipid peroxidation, and DNA damage, ultimately leading to oxidative damage with potential tissue injury or cell death [17,18,19]. Thus, an effective antioxidant response to maintain the balance between oxidation and antioxidation is critical for the function and survival of cells and tissues. The antioxidant defense system is composed of antioxidant enzymes and non-enzymatic cellular antioxidants, such as superoxide dismutase, catalase, vitamin E, and scavengers of hydroxyl radicals [20].
Metabolism is a series of chemical reactions that sustain the life of a living organism [21]. Metabolites, the products of metabolism, have a wide range of functions in cells, such as in providing energy and enabling signal transduction. Glucose and fatty acids provide the majority of cellular energy in animals. It has also been reported that metabolites participate in cell signal transduction by interacting with proteins [22,23,24]. Metabolites such as ATP, acetyl-CoA, and NAD+ can change protein activity by regulating post-translational modifications [25,26,27]. Furthermore, metabolites, as the end products of cell functions, are highly sensitive to environmental changes [28]. Thus, it is important to identify and characterize metabolites and metabolic pathways [29]. Metabolomics is a fundamental and powerful technique for the comprehensive study of metabolites. In this work, we applied untargeted metabolomics to reveal the effect of drought on crayfish metabolism. Untargeted metabolomics analysis focuses on obtaining data for as many species as possible, annotating metabolites, and reviewing both known and unknown metabolic changes [29]. When performed together with high-resolution mass spectrometer, untargeted metabolomic analysis is effective in examining the relationships between interrelated metabolites from multiple pathways [30].
In this study, we aimed to assess changes in the immunity, antioxidation, histopathology, and metabolite changes of crayfish and to gain deeper insight into the mechanisms of their response to drought exposure for 1, 3, and 5 days.
2. Materials and Methods
2.1. Experimental Animals and Drought Exposure
The crayfish were obtained from a local crayfish farm and were kept in plastic boxes at room temperature and fed once daily with commercial pellets. Crayfish were placed under the conditions of 24 h light–dark cycles (LD 12:12) and temperatures of 20 ± 2 °C. The crayfish were allowed an adjustment period of 7 days, before individual crayfish of similar size (9.83 ± 0.84 cm in length, 31.97 ± 9.10 g in wet weight) were then selected for the drought exposure experiments. Crayfish were kept in boxes with a mixture of sand and garden soil to simulate drought. The drought exposure time was 1, 3, and 5 days. In the metabolomics and survival analysis, there were 10 individuals each in the control and the drought groups. For all other experiments, there were 5 individuals in each group.
2.2. Total Hemocytes Count
Hemolymph samples were collected from the control group and the drought groups with anticoagulant solution (27 mM sodium citrate, 336 mM NaCl, 115 mM glucose, 9 mM EDTA, pH 7). Hemolymph was centrifuged at 1000× g for 5 min at 4 °C to collect the hemocytes. Hemocytes were then washed twice and resuspended in ice-cold crayfish-saline (CFS; 0.22 M NaCl, 5.4 mM KCl, 2.6 mM MgCl2, 2 mM NaHCO3, pH 7.4) [31]. Total hemocyte counts were analyzed on NovoCyte flow cytometer systems.
2.3. Phagocytosis Assay
Hemolymph was collected from crayfish in the drought and control groups using the method described in Section 2.2. Each group contained 5 individuals. A phagocytosis assay was implemented using fluorescent red latex beads (1 μm diameter, L-2778, Sigma-Aldrich, St. Louis, MO, USA). Before beginning this assay, latex beads were added to CFS and placed in an incubator at 37 °C for pre-warming; the pre-warmed beads were then incubated with hemocytes for 4 h at 37 °C. Pre-cooled CFS was added to terminate phagocytosis. Hemocytes were harvested and analyzed using NovoCyte flow cytometer systems (PE channel).
2.4. ROS Detection
Single-cell hepatopancreas tissue suspension was prepared before ROS detection. The hepatopancreases of crayfish were diced, mashed, and resuspended with CFS. Then, the product was passed through a 40-μm cell strainer (CSS010040, BIOFIL, Guangzhou, China). Cells were collected after 5 min centrifugation at 1000× g. The cells were then washed and resuspended with CFS. ROS detection was performed using the DCFH-DA oxidation method according to the protocol of the detection kit (S0033S, Beyotime, Shanghai, China). DCFH-DA was added to the cell suspension at a ratio of 1:1000. Fluorescent probes were allowed to diffuse into cells during a 20-min incubation at 37 °C. Afterwards, extra DCFH-DA was removed by washing with ice-cold CFS. ROS levels were determined on the NovoCyte flow cytometer systems (FITC channel).
2.5. Hematoxylin and Eosin Staining
Hepatopancreas tissues were immediately fixed with 4% paraformaldehyde solution after being removed from the crayfish. The samples were cut into 4-μm-thick sections using a microtome (RM2016, Laike, Xiangfan, China) and stained by hematoxylin and eosin (H&E) according to routine protocols including dewaxing, hematoxylin staining, eosin dye staining, and sealing. Dewaxing was performed as follows: xylene I for 20 min, xylene II for 20 min, 100% ethanol I for 5 min, 100% ethanol II for 5 min, 75% ethanol for 5 min, and rinsing with tap water. After dewaxing, sections were stained with hematoxylin solution for 3–5 min, treated with hematoxylin differentiation solution and with Scott’s Tap Water Substitute for hematoxylin bluing, and then rinsed with tap water. The sections were then stained with eosin dye for 5 min. The last step was to dehydrate and seal with neutral gum. The tissue sections were examined and photographed with an upright optical microscope (Nikon Eclipse E100, Nikon, Tokyo, Japan).
2.7. Statistical Analysis
Data are presented as mean ± standard error of the mean (SEM). Statistical analysis was performed by Student’s t-test when only two value sets were compared. One-way ANOVA was used when the data involved three or more groups. The different letters indicate significant differences between drought times (p < 0.05).
3. Results
3.1. Drought Suppresses Immune Function
Figure 1A shows the THC changes in crayfish under drought exposure. The THC in the control group was 8.92 × 105 mL−1. After 1, 3, and 5 days of drought, the THC was 3.46 × 105, 2.90 × 105, and 2.21 × 105 mL−1, respectively. Compared with the control group crayfish, the THC in crayfish exposed to drought decreased rapidly. In the drought groups, there was no significant difference at 1, 3, and 5 days under drought exposure. Phagocytosis was also detected to evaluate the immune function. After 3 and 5 days drought exposure, the phagocytic ratio of hemocytes decreased by 33% and 66%, respectively. However, after 1 day of drought, there was no significant difference in the phagocytosis rate (Figure 1B,C).
3.2. Drought Promotes Overproduction of ROS in Hepatopancreas
Compared with hepatopancreas from control group crayfish, the ROS level in hepatopancreas dramatically increased in the group exposed to 5 days of drought. However, the ROS level was not statistically increased after drought exposure for 1 and 3 days (Figure 2).
3.3. Drought Induces Histological Disorder in Hepatopancreas
The hepatopancreases of control crayfish were obviously well organized in structure. The hepatic tubules were composed of a variety of different hepatocytes. R cells accounted for the largest proportion of hepatocytes, and fat was abundant in the cytoplasm. Vacuoles with yellow pigment could be seen in the cytoplasm of F cells. The tubule lumens were well organized and had an asterisk-like appearance. Exudation and inflammatory cell infiltration were not observed in the intercellular substance (Figure 3a). After drought exposure for 1 day, the hepatopancreas structures remained well organized (Figure 3b).
The hepatopancreas structures of crayfish exposed to drought for 3 days were different from those of control samples, with evidence of hepatic tubule expansion and tubule lumen dilatation. Additionally, epithelial cells became shorter, and more tissue fragments appeared in lumens. Yellow pigment could be seen in the cytoplasm of individual F cells. Specifically, a small amount of oozing protein fluid was seen in the local intercellular substance and inflammatory cell infiltration was present (Figure 3c).
After 5 days of drought exposure, the hepatopancreases of crayfish were observed to have abnormal structures. The foamy cytoplasm of R cells disappeared, and more round vacuoles of different sizes were seen. Inflammatory cell infiltration was obvious in the hepatopancreases, the hepatic tubule structures were markedly disorganized, and some tubules were damaged and ruptured (Figure 3d).
4. Discussion
In this study, we confirmed that drought can weaken the immune function of crayfish. As an important indicator of hemocytes function, THC is often used to assess the immune function of crayfish [32,33]. Our results indicated that THC was significantly decreased in the control group (8.9 × 105 mL−1) compared to the 1-day drought group (3.5 × 105 mL−1). Although there was no significant difference in THC among the drought groups, it showed a downward trend with the increasing of the drought period. The THC results indicated that a short period of drought could lead to a significant decrease in THC, and as the drought period continued, the decline in THC slowed down. Crayfish lack an adaptive immune system and rely mainly on innate immunity [34]. Phagocytosis is one of the fundamental cellular immune defense parameters, and helps to eliminate invading pathogens. Phagocytosis of foreign pathogens is mainly completed by hemocytes [33,35]. Phagocytosis was found to be reduced after drought exposure for 3 and 5 days, but not for 1 day. Particularly, phagocytosis decreased by 66% after 5 days of drought. According to these results, we infer that drought suppresses the immune function of crayfish, and the decline in phagocytic ability may be a possible reason.
Excessive accumulation of ROS caused by environmental stress could result in oxidative stress, leading to lipid peroxidation, DNA damage, and tissue injury. Thus, an effective antioxidant response is essential for aquatic organisms to cope with oxidative stress [36,37,38]. In our study, we found increased ROS levels in hepatopancreas after 5 days of drought, but not after exposure for only 1 or 3 days. ROS also serves as a defense mechanism against microbial infection and plays a role in multiple immune responses [39]. The innate immune system is the first line of host defense, and one important mechanism is the production of ROS [40]. Phagocytic cells release large amounts of ROS to cope with microbial infections, a process referred to as respiratory burst or oxidative burst. Therefore, the increase in ROS after drought exposure is more likely due to the decrease in antioxidant capacity. The responses of the immune system and antioxidant defense may potentially be related. The mechanism of ROS production and the effects of ROS on crayfish under drought conductions need further research.
Histological disorder is a higher-level biological organization response, reflecting prior alteration in physiological and/or biochemical functions [41]. Environmental stress can cause tissue damage, which has been widely reported [42,43]. A histopathological examination is a fundamental and useful tool to study the pathological processes of organisms under environmental stress [41,44]. In our study, structural damage to the hepatopancreas was severe with prolonged drought. Hepatic tubule rupture and tubule lumen dilatation were clearly observed. Moreover, tissue fragments in lumens are compelling evidence of impaired hepatic tubule integrity. Tissue damage and inflammation are orchestrated by the infiltration and activation of various immune cells. After drought exposure for 3 and 5 days, the appearance of immune cell infiltration indicated acute inflammation in the hepatopancreas. These results, combined with the ROS results, suggest that drought may potentially cause tissue damage to the hepatopancreas, and ultimately affect the physiological functions of crayfish.
The results of the hepatopancreas metabolomics analysis showed that amino acids, secondary metabolites, and metabolite cofactors were alternated after drought exposure. Methionine and cysteine, as primary sulfur amino acids (SAAs), play crucial roles in protein structure, metabolism, oxidation, and immunity [45,46]. Cysteine is extremely antioxidative because of the high sensitivity to ROS [47]. The metabolites of cysteine and methionine, such as SAM, polyamines, taurine, and GSH, are essential for critical functions in crayfish. Methionine residues can bind to ROS and then convert to methionine sulfoxide (MetO), which inactivates ROS. Under the catalysis of methionine adenosyltransferase (MAT), methionine produces SAM, which increases cystathionine γ-synthase (CBS) activity, promotes cysteine synthesis, and ultimately upregulates the GSH level. Cysteine residues are also easily oxidized and the antioxidant capability of cysteine is primarily reflected in the products of GSH, hydrogen sulfide (H2S), and taurine. GSH is a prime cellular antioxidant. ROS readily oxidizes GSH to generate glutathione disulfide (GSSG) through the catalysis of GSH-Px. Then, GSSG is reduced to GSH by glutathione reductase. Consequently, the GSH/GSSG cycle is conducive to eliminating ROS and preventing oxidative damage. Cysteine is catabolized to generate hydrogen sulfide (H2S) through a series of desulfuration reactions [48]. It is well known that H2S is an extremely toxic substance for aerobic organisms, partially due to its ability to suppress mitochondrial electron transport chains by reacting with cytochrome c oxidase [49]. However, recent studies have revealed that H2S is an antioxidant agent that works to balance the oxidative and antioxidative systems. Taurine also demonstrates antioxidant capacity, by scavenging ROS, in many models. Our metabolomics results showed that the metabolites involved in cysteine and methionine metabolism, including L-GSH, SAM, and S-glutathionyl-L-cysteine, were downregulated after drought exposure, indicating that the antioxidant capacity of cysteine and methionine was decreased. This result was consistent with the elevated ROS level.
After exposure to drought, the biosynthesis of secondary metabolites was reduced, mainly those functioning as antibacterial compounds, including roseoflavin, dapdiamide A, dapdiamide B, and dapdiamide C. Roseoflavin, the only known natural riboflavin (vitamin B2) analogue with antibiotic activity, targets the FMN riboswitch (a riboflavin transporter) to block cell growth [50,51,52,53]. Dapdiamides are tripeptide antibiotics formed by unconventional amide ligases [54]. The reduction in antibacterial substances indicated that the crayfish were more susceptible to microbial infection under drought exposure. The content of cofactors was changed under drought. Biotin, a water-soluble B-complex vitamin, is well-known as being a cofactor for five indispensable carboxylases (pyruvate carboxylase, acetyl-CoA carboxylase 1, acetyl-CoA carboxylase 2, propionyl-CoA carboxylase, and methyl crotonyl-CoA carboxylase) [55]. Since biotin-dependent carboxylases are involved in a variety of cellular metabolic pathways, an abnormal biotin metabolism may be a key factor in immune and inflammatory diseases caused by biotin deficiency. Biotin deficiency affects the immunological functions of lymphocytes [56]. Biotin demands increase with cell proliferation and activation [57]. When an immune response is initiated, the rate of lymphocyte proliferation increases. Therefore, lymphocytes may be sensitive to the biotin status. In addition, biotin deficiency increases the expression of proinflammatory cytokine genes, such as interleukin 1β (IL-1β), tumor necrosis factor α (TNF-α), and interferon γ2 (IFN-γ2), and enhances the inflammatory response [58,59,60,61]. The decrease in biotin in crayfish after drought exposure may be further supporting evidence for reduced immune function and increased inflammatory hepatopancreas injury.
To disperse between isolated waterbodies, freshwater organisms usually use a variety of methods to cross terrestrial barriers. For an invasive species such as crayfish, in addition to flooding events, other animals, or anthropogenic activity, the ability to walk on land is advantageous as it facilitates spreading to other bodies of water. This is favorable behavior that is conducive to the invasion of crayfish [62]. Successful invasion by crayfish has been reported to be influenced by their immunity [63]. Although we found that their immunity reduced under drought conduction, there was no significant influence on their survival (Figure S3). The ability to survive under drought conditions may, therefore, be a contributing factor to successful crayfish invasion.
In addition to Japan and China, Europe and Africa also have territory occupied by crayfish. Thus, they have become an invasive biological species as well as a world-class food product. Our study found out that drought could suppress the immune function and disrupt the balance of oxidative and antioxidative systems, which might provide some clues for crayfish breeding and control technology.
5. Conclusions
Under drought conditions, the immunity, histopathology, and metabolism of crayfish were found to be altered. After drought exposure, THC and phagocytosis were decreased. The ROS levels were increased, and the hepatopancreas structure became disorganized. These results indicated a decline in immune function, an imbalance in the oxidant and antioxidant systems, and metabolic changes in crayfish after drought exposure. The metabolites that were altered in response were mainly amino acids, secondary metabolites, and cofactors. This study thus provides more information on the mechanisms by which crayfish cope with drought.
Supplementary Materials
The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/ani12070890/s1, Figure S1. Expression profiles of differential metabolites after drought exposure in (a) positive and (b) negative ion mode. Figure S2. Changes in ion intensity potential biomarkers. Figure S3. Survival of crayfish. Table S1. Significantly altered metabolites.
Funding
This research was funded by Agricultural New Variety Creation Project of Jiangsu Province (grant number PZCZ201746) and the Key Research and Development Program (Modern Agriculture) of Jiangsu Province (BE2019393).
Institutional Review Board Statement
This study was conducted in Nanjing University. This study received an exemption from the Animal Ethical and Welfare Committee of NJU. In this study, with reference to the relevant regulations on the welfare and ethics of experimental animals in China, an experimental protocol that conforms to the principles of animal protection, animal welfare, and ethics was formulated.
Informed Consent Statement
Not applicable.
Data Availability Statement
All data generated or analyzed during this study are included in this article. Pathway analysis was performed with the MATLAB scripting language (Mathworks®, Natick, MA, USA), using the MetaboAnalyst (http://www.metaboanalyst.ca/) and KEGG (http://www.genome.jp/kegg/) websites, both accessed on 4 March 2022.
Conflicts of Interest
The authors declare no conflict of interest.
Footnotes
Footnote Group
References
Untitled section
References
- 1.Dudgeon D., Arthington A.H., Gessner M.O., Kawabata Z., Knowler D.J., Leveque C., Naiman R.J., Prieur-Richard A.H., Soto D., Stiassny M.L., et al. Freshwater biodiversity: Importance, threats, status and conservation challenges. Biol. Rev. Camb. Philos. Soc. 2006;81:163–182. doi: 10.1017/S1464793105006950.
- 2.Harrison I., Abell R., Darwall W., Thieme M.L., Tickner D., Timboe I. The freshwater biodiversity crisis. Science. 2018;362:1369. doi: 10.1126/science.aav9242.
- 3.Richman N.I., Bohm M., Adams S.B., Alvarez F., Bergey E.A., Bunn J.J., Burnham Q., Cordeiro J., Coughran J., Crandall K.A., et al. Multiple drivers of decline in the global status of freshwater crayfish (Decapoda: Astacidea) Philos. Trans. R. Soc. B. 2015;370:20140060. doi: 10.1098/rstb.2014.0060.
- 4.Kouba A., Tikal J., Cisar P., Vesely L., Fort M., Priborsky J., Patoka J., Buric M. The significance of droughts for hyporheic dwellers: Evidence from freshwater crayfish. Sci. Rep. 2016;6:26569. doi: 10.1038/srep26569.
- 5.Jeremias G., Barbosa J., Marques S.M., Asselman J., Goncalves F.J.M., Pereira J.L. Synthesizing the role of epigenetics in the response and adaptation of species to climate change in freshwater ecosystems. Mol. Ecol. 2018;27:2790–2806. doi: 10.1111/mec.14727.
- 6.Guo W., Weiperth A., Hossain M.S., Kubec J., Grabicova K., Lozek F., Vesely L., Blaha M., Buric M., Kouba A., et al. The effects of the herbicides terbuthylazine and metazachlor at environmental concentration on the burrowing behaviour of red swamp crayfish. Chemosphere. 2021;270:128656. doi: 10.1016/j.chemosphere.2020.128656.
- 7.Guo W., Hossain M.S., Kubec J., Grabicova K., Randak T., Buric M., Kouba A. Psychoactive compounds at environmental concentration alter burrowing behavior in the freshwater crayfish. Sci. Total Environ. 2020;711:135138. doi: 10.1016/j.scitotenv.2019.135138.
- 8.Matthews W.J., Marsh-Matthews E. Effects of drought on fish across axes of space, time and ecological complexity. Freshw. Biol. 2003;48:1232–1253. doi: 10.1046/j.1365-2427.2003.01087.x.
- 9.Alkan Uckun A., Barim Oz O. Acute exposure to the fungicide penconazole affects some biochemical parameters in the crayfish (Astacus leptodactylus Eschscholtz, 1823) Environ. Sci. Pollut. Res. Int. 2020;27:35626–35637. doi: 10.1007/s11356-020-09595-2.
- 10.Volpe M.G., Ghia D., Safari O., Paolucci M. Fast non-destructive assessment of heavy metal presence by ATR-FTIR analysis of crayfish exoskeleton. Environ. Sci. Pollut. Res. Int. 2020;27:21021–21031. doi: 10.1007/s11356-020-08405-z.
- 11.Gherardi F. Invasive crayfish and freshwater fishes of the world. Rev. Sci. Technol. 2010;29:241–254. doi: 10.20506/rst.29.2.1973.
- 12.Calderon-Rosete G., Gonzalez-Barrios J.A., Lara-Lozano M., Pina-Leyva C., Rodriguez-Sosa L. Transcriptional Identification of Related Proteins in the Immune System of the Crayfish Procambarus clarkii. High-Throughput. 2018;7:26. doi: 10.3390/ht7030026.
- 13.Bouallegui Y. A Comprehensive Review on Crustaceans’ Immune System With a Focus on Freshwater Crayfish in Relation to Crayfish Plague Disease. Front. Immunol. 2021;12:667787. doi: 10.3389/fimmu.2021.667787.
- 14.Soderhall I. Crustacean hematopoiesis. Dev. Comp. Immunol. 2016;58:129–141. doi: 10.1016/j.dci.2015.12.009.
- 15.Zhang W., Li J., Chen Y., Si Q., Tian J., Jiang Q., Yang J. Exposure time relevance of response to nitrite exposure: Insight from transcriptional responses of immune and antioxidant defense in the crayfish, Procambarus clarkii. Aquat. Toxicol. 2019;214:105262. doi: 10.1016/j.aquatox.2019.105262.
- 16.Liu F., Qu Y.K., Geng C., Wang A.M., Zhang J.H., Chen K.J., Liu B., Tian H.Y., Yang W.P., Yu Y.B. Effects of hesperidin on the growth performance, antioxidant capacity, immune responses and disease resistance of red swamp crayfish (Procambarus clarkii) Fish Shellfish Immunol. 2020;99:154–166. doi: 10.1016/j.fsi.2020.02.014.
- 17.Guo K., Ruan G., Fan W., Fang L., Wang Q., Luo M., Yi T. The effect of nitrite and sulfide on the antioxidant capacity and microbial composition of the intestines of red swamp crayfish, Procambarus clarkii. Fish Shellfish Immunol. 2020;96:290–296. doi: 10.1016/j.fsi.2019.11.052.
- 18.Hossain M.M., Huang H., Yuan Y., Wan T., Jiang C., Dai Z., Xiong S., Cao M., Tu S. Silicone stressed response of crayfish (Procambarus clarkii) in antioxidant enzyme activity and related gene expression. Environ. Pollut. 2021;274:115836. doi: 10.1016/j.envpol.2020.115836.
- 19.Hong Y., Huang Y., Yan G., Yin H., Huang Z. DNA damage, immunotoxicity, and neurotoxicity induced by deltamethrin on the freshwater crayfish, Procambarus clarkii. Environ. Toxicol. 2020;36:16–23. doi: 10.1002/tox.23006.
- 20.Staerck C., Gastebois A., Vandeputte P., Calenda A., Larcher G., Gillmann L., Papon N., Bouchara J.P., Fleury M.J.J. Microbial antioxidant defense enzymes. Microb. Pathog. 2017;110:56–65. doi: 10.1016/j.micpath.2017.06.015.
- 21.Judge A., Dodd M.S. Metabolism. Essays Biochem. 2020;64:607–647. doi: 10.1042/EBC20190041.
- 22.Gallego O., Betts M.J., Gvozdenovic-Jeremic J., Maeda K., Matetzki C., Aguilar-Gurrieri C., Beltran-Alvarez P., Bonn S., Fernandez-Tornero C., Jensen L.J., et al. A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae. Mol. Syst. Biol. 2010;6:430. doi: 10.1038/msb.2010.87.
- 23.Liu X., Zhang X., Zhang J., Luo Y., Xu B., Ling S., Zhang Y., Li W., Yao X. Activation of aryl hydrocarbon receptor in Langerhans cells by a microbial metabolite of tryptophan negatively regulates skin inflammation. J. Dermatol. Sci. 2020;100:192–200. doi: 10.1016/j.jdermsci.2020.10.004.
- 24.Li X., Gianoulis T.A., Yip K.Y., Gerstein M., Snyder M. Extensive in vivo metabolite-protein interactions revealed by large-scale systematic analyses. Cell. 2010;143:639–650. doi: 10.1016/j.cell.2010.09.048.
- 25.Dang M., Li Y., Song J. ATP biphasically modulates LLPS of SARS-CoV-2 nucleocapsid protein and specifically binds its RNA-binding domain. Biochem. Biophys. Res. Commun. 2021;541:50–55. doi: 10.1016/j.bbrc.2021.01.018.
- 26.Dieterich I.A., Lawton A.J., Peng Y., Yu Q., Rhoads T.W., Overmyer K.A., Cui Y., Armstrong E.A., Howell P.R., Burhans M.S., et al. Acetyl-CoA flux regulates the proteome and acetyl-proteome to maintain intracellular metabolic crosstalk. Nat. Commun. 2019;10:3929. doi: 10.1038/s41467-019-11945-9.
- 27.Nakahata Y., Kaluzova M., Grimaldi B., Sahar S., Hirayama J., Chen D., Guarente L.P., Sassone-Corsi P. The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control. Cell. 2008;134:329–340. doi: 10.1016/j.cell.2008.07.002.
- 28.Ma S., Kim A., Lee W., Kim S., Lee S., Yoon D., Bae J.S., Park C.I., Kim S. Vibrio harveyi Infection Significantly Alters Amino Acid and Carbohydrate Metabolism in Whiteleg Shrimp, Litopenaeus vannamei. Metabolites. 2020;10:265. doi: 10.3390/metabo10060265.
- 29.Schrimpe-Rutledge A.C., Codreanu S.G., Sherrod S.D., McLean J.A. Untargeted Metabolomics Strategies-Challenges and Emerging Directions. J. Am. Soc. Mass Spectrom. 2016;27:1897–1905. doi: 10.1007/s13361-016-1469-y.
- 30.Johnson C.H., Ivanisevic J., Siuzdak G. Metabolomics: Beyond biomarkers and towards mechanisms. Nat. Rev. Mol. Cell Biol. 2016;17:451–459. doi: 10.1038/nrm.2016.25.
- 31.Zhang X.W., Wang Y., Wang X.W., Wang L., Mu Y., Wang J.X. A C-type lectin with an immunoglobulin-like domain promotes phagocytosis of hemocytes in crayfish Procambarus clarkii. Sci. Rep. 2016;6:29924. doi: 10.1038/srep29924.
- 32.Liu F., Li S., Yu Y., Sun M., Xiang J., Li F. Effects of ammonia stress on the hemocytes of the Pacific white shrimp Litopenaeus vannamei. Chemosphere. 2020;239:124759. doi: 10.1016/j.chemosphere.2019.124759.
- 33.Li F., Chang X., Xu L., Yang F. Different roles of crayfish hemocytes in the uptake of foreign particles. Fish Shellfish Immunol. 2018;77:112–119. doi: 10.1016/j.fsi.2018.03.029.
- 34.Loker E.S., Adema C.M., Zhang S.M., Kepler T.B. Invertebrate immune systems--not homogeneous, not simple, not well understood. Immunol. Rev. 2004;198:10–24. doi: 10.1111/j.0105-2896.2004.0117.x.
- 35.He Z., Mao F., Lin Y., Li J., Zhang X., Zhang Y., Xiang Z., Noor Z., Zhang Y., Yu Z. Molecular characteristics of AMPK and its role in regulating the phagocytosis of oyster hemocytes. Fish Shellfish Immunol. 2019;93:416–427. doi: 10.1016/j.fsi.2019.07.075.
- 36.Gao X., Liu X., Song X., Teng P., Ji H., Peng L., Qiu Y., Guo D., Jiang S. Effect of maduramicin on crayfish (Procambius clarkii): Hematological parameters, oxidative stress, histopathological changes and stress response. Ecotoxicol. Environ. Saf. 2021;211:111896. doi: 10.1016/j.ecoenv.2021.111896.
- 37.Ainerua M.O., Tinwell J., Murphy R., Galli G.L.J., van Dongen B.E., White K.N., Shiels H.A. Prolonged phenanthrene exposure reduces cardiac function but fails to mount a significant oxidative stress response in the signal crayfish (Pacifastacus leniusculus) Chemosphere. 2021;268:129297. doi: 10.1016/j.chemosphere.2020.129297.
- 38.Capanni F., Greco S., Tomasi N., Giulianini P.G., Manfrin C. Orally administered nano-polystyrene caused vitellogenin alteration and oxidative stress in the red swamp crayfish (Procambarus clarkii) Sci. Total Environ. 2021;791:147984. doi: 10.1016/j.scitotenv.2021.147984.
- 39.Yang Y., Bazhin A.V., Werner J., Karakhanova S. Reactive oxygen species in the immune system. Int. Rev. Immunol. 2013;32:249–270. doi: 10.3109/08830185.2012.755176.
- 40.Al-Shehri S.S. Reactive oxygen and nitrogen species and innate immune response. Biochimie. 2021;181:52–64. doi: 10.1016/j.biochi.2020.11.022.
- 41.Rodrigues S., Antunes S.C., Nunes B., Correia A.T. Histopathological effects of the antibiotic erythromycin on the freshwater fish species Oncorhynchus mykiss. Ecotoxicol. Environ. Saf. 2019;181:1–10. doi: 10.1016/j.ecoenv.2019.05.067.
- 42.Zhang Y., Li Z., Kholodkevich S., Sharov A., Feng Y., Ren N., Sun K. Microcystin-LR-induced changes of hepatopancreatic transcriptome, intestinal microbiota, and histopathology of freshwater crayfish (Procambarus clarkii) Sci. Total Environ. 2020;711:134549. doi: 10.1016/j.scitotenv.2019.134549.
- 43.Chabera J., Stara A., Kubec J., Buric M., Zuskova E., Kouba A., Velisek J. The effect of chronic exposure to chloridazon and its degradation product chloridazon-desphenyl on signal crayfish Pacifastacus leniusculus. Ecotoxicol. Environ. Saf. 2021;208:111645. doi: 10.1016/j.ecoenv.2020.111645.
- 44.Lutnicka H., Bojarski B., Witeska M., Tombarkiewicz B., Formicki G. Exposure to herbicide linuron results in alterations in hematological profile and stress biomarkers of common carp (Cyprinus carpio) Ecotoxicology. 2019;28:69–75. doi: 10.1007/s10646-018-2000-y.
- 45.Brosnan J.T., Brosnan M.E. The sulfur-containing amino acids: An overview. J. Nutr. 2006;136:1636S–1640S. doi: 10.1093/jn/136.6.1636S.
- 46.Hrncic D., Rasic-Markovic A., Macut D., Mladenovic D., Susic V., Djuric D., Stanojlovic O. Sulfur-Containing Amino Acids in Seizures: Current State of the Art. Curr. Med. Chem. 2018;25:378–390. doi: 10.2174/0929867324666170609090613.
- 47.Ezraty B., Gennaris A., Barras F., Collet J.F. Oxidative stress, protein damage and repair in bacteria. Nat. Rev. Microbiol. 2017;15:385–396. doi: 10.1038/nrmicro.2017.26.
- 48.Stipanuk M.H., Ueki I. Dealing with methionine/homocysteine sulfur: Cysteine metabolism to taurine and inorganic sulfur. J. Inherit. Metab. Dis. 2011;34:17–32. doi: 10.1007/s10545-009-9006-9.
- 49.Dorman D.C., Moulin F.J., McManus B.E., Mahle K.C., James R.A., Struve M.F. Cytochrome oxidase inhibition induced by acute hydrogen sulfide inhalation: Correlation with tissue sulfide concentrations in the rat brain, liver, lung, and nasal epithelium. Toxicol. Sci. 2002;65:18–25. doi: 10.1093/toxsci/65.1.18.
- 50.Schwarz J., Konjik V., Jankowitsch F., Sandhoff R., Mack M. Identification of the Key Enzyme of Roseoflavin Biosynthesis. Angew. Chem. Int. Ed. Engl. 2016;55:6103–6106. doi: 10.1002/anie.201600581.
- 51.Lee E.R., Blount K.F., Breaker R.R. Roseoflavin is a natural antibacterial compound that binds to FMN riboswitches and regulates gene expression. RNA Biol. 2009;6:187–194. doi: 10.4161/rna.6.2.7727.
- 52.Mansjo M., Johansson J. The riboflavin analog roseoflavin targets an FMN-riboswitch and blocks Listeria monocytogenes growth, but also stimulates virulence gene-expression and infection. RNA Biol. 2011;8:674–680. doi: 10.4161/rna.8.4.15586.
- 53.Ott E., Stolz J., Lehmann M., Mack M. The RFN riboswitch of Bacillus subtilis is a target for the antibiotic roseoflavin produced by Streptomyces davawensis. RNA Biol. 2009;6:276–280. doi: 10.4161/rna.6.3.8342.
- 54.Dawlaty J., Zhang X., Fischbach M.A., Clardy J. Dapdiamides, tripeptide antibiotics formed by unconventional amide ligases. J. Nat. Prod. 2010;73:441–446. doi: 10.1021/np900685z.
- 55.Kuroishi T. Regulation of immunological and inflammatory functions by biotin. Can. J. Physiol. Pharmacol. 2015;93:1091–1096. doi: 10.1139/cjpp-2014-0460.
- 56.Mall G.K., Chew Y.C., Zempleni J. Biotin requirements are lower in human Jurkat lymphoid cells but homeostatic mechanisms are similar to those of HepG2 liver cells. J. Nutr. 2010;140:1086–1092. doi: 10.3945/jn.110.121475.
- 57.Crisp S.E., Griffin J.B., White B.R., Toombs C.F., Camporeale G., Said H.M., Zempleni J. Biotin supply affects rates of cell proliferation, biotinylation of carboxylases and histones, and expression of the gene encoding the sodium-dependent multivitamin transporter in JAr choriocarcinoma cells. Eur. J. Nutr. 2004;43:23–31. doi: 10.1007/s00394-004-0435-9.
- 58.Agrawal S., Agrawal A., Said H.M. Biotin deficiency enhances the inflammatory response of human dendritic cells. Am. J. Physiol. Cell Physiol. 2016;311:C386–C391. doi: 10.1152/ajpcell.00141.2016.
- 59.Skupsky J., Sabui S., Hwang M., Nakasaki M., Cahalan M.D., Said H.M. Biotin Supplementation Ameliorates Murine Colitis by Preventing NF-kappaB Activation. Cell. Mol. Gastroenterol. Hepatol. 2020;9:557–567. doi: 10.1016/j.jcmgh.2019.11.011.
- 60.Attia H., Albuhayri S., Alaraidh S., Alotaibi A., Yacoub H., Mohamad R., Al-Amin M. Biotin, coenzyme Q10, and their combination ameliorate aluminium chloride-induced Alzheimer’s disease via attenuating neuroinflammation and improving brain insulin signaling. J. Biochem. Mol. Toxicol. 2020 doi: 10.1002/jbt.22519.
- 61.He P., Jiang W.D., Liu X.A., Feng L., Wu P., Liu Y., Jiang J., Tan B.P., Yang Q.H., Kuang S.Y., et al. Dietary biotin deficiency decreased growth performance and impaired the immune function of the head kidney, spleen and skin in on-growing grass carp (Ctenopharyngodon idella) Fish Shellfish Immunol. 2020;97:216–234. doi: 10.1016/j.fsi.2019.12.033.
- 62.Thomas J.R., Masefield S., Hunt R., Wood M.J., Hart A.G., Hallam J., Griffiths S.W., Cable J. Terrestrial emigration behaviour of two invasive crayfish species. Behav. Process. 2019;167:103917. doi: 10.1016/j.beproc.2019.103917.
- 63.Dragicevic P., Grbin D., Maguire I., Blazevic S.A., Abramovic L., Tarandek A., Hudina S. Immune Response in Crayfish Is Species-Specific and Exhibits Changes along Invasion Range of a Successful Invader. Biology. 2021;10:1102. doi: 10.3390/biology10111102.
Associated Data
Supplementary Materials
Data Availability Statement
All data generated or analyzed during this study are included in this article. Pathway analysis was performed with the MATLAB scripting language (Mathworks®, Natick, MA, USA), using the MetaboAnalyst (http://www.metaboanalyst.ca/) and KEGG (http://www.genome.jp/kegg/) websites, both accessed on 4 March 2022.