Tissue metabolomics reveals metabolic dysregulation associated with intimal hyperplasia in arteriovenous fistula stenosis
Department of Nephrology, 3201 Hospital, Hanzhong, Shaanxi, China
School of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi, China
School of Medicine, Nanchang University, Nanchang, Jiangxi, China
Abstract
Objective
This study performed untargeted LC-MS metabolomics on venous tissues from maintenance hemodialysis patients undergoing arteriovenous fistula (AVF) reconstruction surgery.
Methods
A total of six stenotic and six non-stenotic AVF tissues were analyzed. Paired samples were collected from stenotic AVF segments and non-stenotic regions (control group). Histological analysis revealed significant intimal hyperplasia in stenotic tissues (687.90 ± 149.00 μm vs. 286.70 ± 95.18 μm, P < 0.0001 by HE staining) and excessive collagen deposition (Masson staining).
Results
Metabolomic profiling identified 802 metabolites, with 356 differentially expressed (VIP > 1, P < 0.05), predominantly lipids/lipid-like molecules. KEGG enrichment highlighted five dysregulated pathways (P < 0.01): Arginine/proline metabolism; Glycerophospholipid metabolism; ABC transporters; Choline metabolism in cancer; Retrograde endocannabinoid signaling. Six metabolites showed perfect diagnostic potential (AUC = 1.0): niacin, free carnitine, 3-hydroxynonyl-5,7-dienoylcarnitine, 3-methylheptanediylcarnitine, dec-7-enoylcarnitine, and γ-aminobutyric acid. Significant metabolite-clinical correlations included: Choline positively correlating with serum phosphorus (r = 0.62, P = 0.008); Carnitine associating with hemoglobin levels (r = 0.58, P = 0.012).
Conclusion
This tissue-based metabolomics study defines specific metabolic disturbances driving AVF stenosis, proposing mechanistic insights and candidate biomarkers.
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Keywords: metabolomics, end-stage renal disease, arteriovenous fistula stenosis, biomarkers, intimal hyperplasia
Article notes
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Received 2025 May 30; Accepted 2025 Jul 31; Collection date 2025.
1 Introduction
Arteriovenous fistula (AVF) is the preferred vascular access for maintenance hemodialysis due to its superior long-term patency and lower complication. However, its clinical efficacy is severely compromised by a high incidence of stenosis, primarily driven by pathological intimal hyperplasia (Sidawy et al., 2002). Despite advancements in imaging and surgical techniques, the prevention and early detection of AVF dysfunction remain major challenges in end-stage renal disease (ESRD) management.
Intimal hyperplasia, characterized by vascular smooth muscle cell proliferation and extracellular matrix deposition, is a key contributor to AVF stenosis and failure. This process shares multiple features with other vascular proliferative diseases, including atherosclerosis and restenosis after angioplasty, suggesting common underlying mechanisms involving vascular remodeling and metabolic dysregulation (Bozzetto et al., 2023; Yan et al., 2024). However, the molecular basis of these processes in the context of AVF remains incompletely understood.
Metabolomics, as an emerging systems biology approach, enables comprehensive profiling of small-molecule metabolites and provides new opportunities to investigate the biochemical alterations underlying complex vascular pathologies. Previous metabolomics studies have primarily relied on blood samples, which are susceptible to systemic confounders and may not accurately reflect local tissue-level metabolic changes (Schlosser et al., 2024; Meyers, 2022). In contrast, direct metabolomic profiling of stenotic AVF tissue offers the potential to uncover more specific metabolic signatures associated with intimal hyperplasia (Anwar et al., 2015; Klusman et al., 2023).
In this study, we performed untargeted metabolomics analysis using high-resolution liquid chromatography–mass spectrometry (LC-MS) on AVF venous tissue from patients with and without stenosis. We aimed to identify differentially expressed metabolites and disrupted metabolic pathways that may contribute to AVF failure, and to explore their potential as early biomarkers for clinical application. Our findings provide novel insights into the metabolic underpinnings of AVF stenosis and offer a new perspective for personalized intervention in ESRD vascular access management.
2 Materials and methods
2.1 Sample collection
AVF venous tissue samples were obtained from patients undergoing maintenance hemodialysis at the 3201 Hospital (Hanzhong, China) in 2024. All enrolled patients underwent AVF reconstruction surgery, during which stenotic and non-stenotic vein segments were collected. The study protocol was approved by the Institutional Review Board of the 3201 Hospital (Approval Number: Yuan Lun Li Shen [2023] No. 033), and written informed consent was obtained from all participants.
2.2 Study subjects
Control cohort: The vascular tissue collected prior to autogenous arteriovenous fistula (AVF) hyperplasia (Control group).
Hyperplasia cohort: Vascular tissues obtained from sites of arteriovenous fistula hyperplasia (AVF group).
Fixation and Preservation: Vascular tissues were excised aseptically from predetermined anatomical sites, immediately frozen in liquid nitrogen, and stored at −80°C.
Clinical information: patient demographics and laboratory indicators, was retrieved from the hospital’s electronic medical record system during the time of AVF tissue sampling.
2.3 Preparation of quality control (QC) samples
Equal volumes of metabolites from all samples were pooled to generate QC samples. One QC sample was inserted after every 5 to 15 experimental samples during analysis.
2.4 Instrumentation and reagents
Untargeted metabolomic profiling was performed using an UHPLC-Orbitrap Exploris 240 mass spectrometer (Thermo Fisher Scientific, United States) coupled with an Ultimate 3000 UHPLC system. Metabolites were extracted by protein precipitation with cold methanol, followed by centrifugation and supernatant collection. All solvents used were LC-MS grade (methanol, acetonitrile, formic acid, water, and isopropanol from Fisher Scientific, United States). Quality control (QC) samples were prepared by pooling equal volumes of each sample and were injected at regular intervals throughout the analytical sequence to assess system stability and reproducibility. Data acquisition was conducted in both positive and negative ionization modes.
2.5 Tissue staining
Vascular tissue specimens were fixed in 4% paraformaldehyde, embedded in paraffin, and sectioned into serial slices of 4 µm thickness. Hematoxylin-eosin (HE) staining (Wei et al., 2024), Masson’s trichrome staining (Hu et al., 2024).
2.7 Statistical analysis
The resulting data matrix was uploaded to the Majorbio Cloud Platform (www.majorbio.com) for multivariate statistical analysis. Principal component analysis (PCA) and orthogonal partial least squares-discriminant analysis (OPLS-DA) were employed to visualize group separation. Variable importance in projection (VIP) values >1 and p-values <0.05 were used to select significantly altered metabolites. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis was performed to identify significantly affected metabolic pathways.
3 Results
3.1 Observation of tissue sections in AVF and control groups
In the HE-stained venous sections, disordered cellular arrangement, evident proliferation and accumulation, significant intimal thickening, a blurred boundary between the intima and media, and an irregular intimal surface were observed in the AVF group compared to the control group, intuitively indicating intimal hyperplasia (Figure 1A). Quantitative analysis of the HE-stained venous sections revealed that vascular thickness was significantly increased in the AVF group compared to the control group [(286.7 ± 95.2) μm vs. (687.9 ± 149.0) μm, P < 0.0001], indicating a statistically significant difference (Figure 1B).
Collagen deposition was assessed using Masson staining. Compared with the control group, abundant blue-stained collagen fibers were observed in the AVF group, particularly around the vessels, displaying pronounced proliferation and a dense, disordered distribution (Figure 1C). These findings indicate that excessive deposition of extracellular matrix collagen fibers during intimal hyperplasia leads to irregular luminal morphology and deformation, subsequently affecting blood flow and vascular function.
The results of HE and Masson staining demonstrated significant intergroup differences in cellular morphology and arrangement, intimal thickness, and both the distribution and content of collagen fibers.
3.5 Discovery of candidate biomarkers for venous intimal hyperplasia
To further identify potential biomarkers associated with intimal proliferation in the AVF group, receiver operating characteristic (ROC) curve analysis and heatmap visualization were employed. To minimize confounding effects from medications, drug-related metabolites were excluded. Subsequently, metabolites with the top 20 OPLS-DA VIP values and an area under the ROC curve (AUC) ≥0.90 were selected for ROC curve analysis (Figure 5). Among the identified candidates, niacin, free carnitine, three acylcarnitines (3-hydroxynonyl-5,7-dienoylcarnitine, 3-methylheptanediylcarnitine, and Dec-7-enoylcarnitine), as well as γ-aminobutyric acid (GABA), exhibited perfect diagnostic performance with an AUC of 1.0.
4 Discussion
AVF dysfunction, a critical complication in haemodialysis for patients with ESRD, is frequently initiated by intimal hyperplasia and abnormal vascular remodeling, ultimately resulting in access failure. The metabolic profile of AVF has been shown to differ significantly from that of other vasculoproliferative conditions, suggesting that its distinct mechanical adaptation interacts dynamically with the local microenvironment. Metabolic alterations, identified through high-resolution mass spectrometry (HRMS) combined with multivariate statistical analysis, have been implicated in driving pathological vascular remodeling through several mechanisms.
5 Conclusion
The metabolic characteristics of vascular hyperplasia in AVF were elucidated through vascular tissue metabolomics, and it was hypothesized that intimal hyperplasia in the AVF group might be promoted by abnormal alterations in multiple metabolic pathways. Alterations in lipid metabolism influence the composition and function of cell membranes. Imbalances in energy metabolism impair normal physiological activity and reduce the proliferative capacity of cells. Dysregulation of amino acid metabolism disrupts protein synthesis and cellular proliferation. Oxidative stress and inflammation initiate a cascade of cellular responses, potentially creating favorable conditions for intimal hyperplasia.
Acknowledgments
We sincerely thank Shaanxi University of Technology for their support during the course of this study.
Funding Statement
The author(s) declare that financial support was received for the research and/or publication of this article. This study was supported by Genertec Medical Co., Ltd. (grant number TYYLKYJJ - 2023 - 013), awarded to Professor Ming Zhao of 3201 Hospital. The funder was not involved in the study design, collection, analysis, interpretation of data, the writing of this article, or the decision to submit it for publication.
Data availability statement
Datasets are available on request: The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.
Ethics statement
The studies involving humans were approved by Full Name of Ethics Committee: Medical Ethics Committee of 3201 Hospital Affiliation: 3201 Hospital, Hanzhong, Shaanxi Province, China. The studies were conducted in accordance with the local legislation and institutional requirements. The participants provided their written informed consent to participate in this study.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Generative AI statement
The author(s) declare that Generative AI was used in the creation of this manuscript. Declaration of generative AI and AI-assisted technologies in the writing process: Â During the preparation of this work the author(s) used ChatGPT in order to improve a manuscript’s language and readability.
Publisher’s note
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Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fphys.2025.1638179/full#supplementary-material
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Associated Data
Supplementary Materials
Data Availability Statement
Datasets are available on request: The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.